Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890021.1_cds_XP_016444706.1_39739
CDS Infomation

[gene=LOC107769960] [db_xref=GeneID:107769960] [protein=pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like] [protein_id=XP_016444706.1] [location=complement(join(6699..6922,7014..8357,10104..10113))] [gbkey=CDS]
Sequence

ATGGGATCAGTTCAAAGGCTCATTCGTGGCCTTTCTTCATCGAGAGAGTGTGCAAGGCAG
GGATTTGCATTAGGCCTGGCAATATTGGTTAGTGCATTTCCATGCATAAAATTGGATGCA
CTGTCGAAGTTAACTGTCGACTTGTTGGAGGATCAGGACAAAGATTGCCTATTCGGATGC
TTGTTTACTTATGGGGCGTCTTGGAATAATATGATATCTGGGTATGTTAGGATGGGTCTT
TACTTGTATGCTGTAATTCTTTTTGTTGAAATGTGGGGTTTTGGAATTCAACCAAATGGG
TATTTTGTGGCTAGCTTGTTGACTGCATTCAGTAGATTGGAAAATATGGTTTTGGAAGGA
TTTCAAATTCATGGATTGGTTATGAAATATGGTTTGTTGAATGATGTTTTTGTGGAAACT
TCTTTTCTCCATTTTTATGGTGTATATGGACTACCTTGTAGTGCTAAAGCACTGTTTGAG
GAAATGCCTGAAGGGAATGTTGTAACTTGGACTTCCTTGATGGTTGCATATTCAGATAAT
GGTTACCCAGAGGTGGTAATAGATCTGTACCGAAGAATGGGACATGATGAGGTGTCTGGT
AATGAAAACACATGTACTGCTGTTATTAGTTCTTGCATAGCTCTTGATGATGATTTTTTG
GGTCATCAAATGCTAGGTCAGGTTGTAAAGTCTGGATTCCAAGACCATGTTTCTGTATCA
AATTCTCTTATTTCGATGTTTGGTAGTTTTGGTTGCATTGAAGATGCCTCTTATATCTTT
GAGGCCATGATTGACCGTGACACTATATCATGGAATTCGATTATTTCAGCACTAGCGTAT
AACCAATTGTACAAGAAAGCGTTCAACTCCTTTTCTGAAATGCGTCATGTTCATGATGAT
GTCAATTCAACTACACTTTCTGCATTGTTGTCTATATGTGGAACTATTGATTGTCTAAAC
TTAGGCAGAGGTGTTCATAGTTTGTCGTTGAAATCAGGATGGGATTCTAATATTTGTGTG
TGTAATACTCTTCTCTCCATGTATTTGGAGGCTTCGAGGCCCAAAGATGCTGAAAGTTTG
TTCTTTGCCATGGCAGCAAAGGATGTGATTTCGTGGAACTCCATGATGGCTGGTTATGTT
TTAACAGGTAAGTACTTCAAAGCTTTGGAAGTGTTCGCTGAACTGCTTCACTTGCAAAGA
ACAGTTAACTATGTGACTTTCGCTAGTGCTTTGGCTGCGTGTTCAGATGGTCAATTGCTT
GATGAAGGAAAAACTGTTCATGCTCTTGTAATTGTTCATGGGTTCCATAACAATTTAATA
GTTGGCAATGCATTAGTCACCATGAATGGAAAGTATAATAAGGACACACTTGAGGCAGTG
AGAAATTTTAAGTCAATGAGAGAGGAAGAGAATCCTCCAAATTACATTACTTTGATTAAT
GTTCTTGGTTCTTGCTCAACTGAAACTGATCTGCTGAACTATGGCAAGCCGTTGCATGGA
CATATAATTCTGACTGGTTTTGAGACAAATGAATGCGTCAGGAACTCTCTCATCACTATG
TATGCGGACTGCTGTTGA

Peptide Sequence

PEP ID

XP_016444706.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like [Nicotiana tabacum]
Sequence

MGSVQRLIRGLSSSRECARQGFALGLAILVSAFPCIKLDALSKLTVDLLEDQDKDCLFGC
LFTYGASWNNMISGYVRMGLYLYAVILFVEMWGFGIQPNGYFVASLLTAFSRLENMVLEG
FQIHGLVMKYGLLNDVFVETSFLHFYGVYGLPCSAKALFEEMPEGNVVTWTSLMVAYSDN
GYPEVVIDLYRRMGHDEVSGNENTCTAVISSCIALDDDFLGHQMLGQVVKSGFQDHVSVS
NSLISMFGSFGCIEDASYIFEAMIDRDTISWNSIISALAYNQLYKKAFNSFSEMRHVHDD
VNSTTLSALLSICGTIDCLNLGRGVHSLSLKSGWDSNICVCNTLLSMYLEASRPKDAESL
FFAMAAKDVISWNSMMAGYVLTGKYFKALEVFAELLHLQRTVNYVTFASALAACSDGQLL
DEGKTVHALVIVHGFHNNLIVGNALVTMNGKYNKDTLEAVRNFKSMREEENPPNYITLIN
VLGSCSTETDLLNYGKPLHGHIILTGFETNECVRNSLITMYADCC

Transcript Sequence

Gene sequence data has not been registered.